CANDIDA ALBICANS annotation definitions --------------------------------------- 20-11-2001 Common annotations were compiled by Nicole Hauser, Judith Boer, Rosa Arribas, Frank Diehl and have been checked for MIAME2 compliance. Organism specific part by Nicole Hauser, who considered the complete list to satisfy MIAME 1.0 standard. References, images (tiff format), a list of array elements incl. controls (including gene/clone IDs, array location, descriptions and functional catalogue entries for each spot) as well as normalization strategies and algorithms are not included here but will be available in the results section or directly from the authors. heading1no heading1 heading2no heading2 heading3no heading3 1 common_annotations 1 array 1 - 1 common_annotations 2 hybridisation 2 RNA_preparation 1 common_annotations 2 hybridisation 3 labeling 1 common_annotations 2 hybridisation 4 hybridisation_conditions 1 common_annotations 2 hybridisation 5 stringency_wash 1 common_annotations 2 hybridisation 6 detection 1 common_annotations 3 sample 7 - 1 common_annotations 4 submission 8 - 2 organism_specific_annotations 5 genotype 9 - 2 organism_specific_annotations 5 genotype 10 genetic_specification 2 organism_specific_annotations 5 genotype 11 resistance_marker 2 organism_specific_annotations 6 pre_culture 12 - 2 organism_specific_annotations 6 pre_culture 13 C_source 2 organism_specific_annotations 7 main_culture 14 - 2 organism_specific_annotations 7 main_culture 15 medium 2 organism_specific_annotations 7 main_culture 16 C_source 2 organism_specific_annotations 7 main_culture 17 additive 2 organism_specific_annotations 7 main_culture 18 growth_condition_shift 2 organism_specific_annotations 7 main_culture 19 lighting_conditions lastheadingno ano nextano annotation vno nextvno value 1 1 2 array_source 10 11 self_made 1 1 2 array_source 11 12 genome_systems 1 1 2 array_source 12 13 clontech 1 1 2 array_source 13 14 research_genetics 1 2 3 array_series 0 0 [] 1 3 4 array_individual 0 0 [] 1 4 67 array_support 14 15 nylon 1 4 67 array_support 15 16 polypropylene 1 4 67 array_support 16 117 glass 1 67 68 array_support_width 0 0 [mm] 1 68 41 array_support_length 0 0 [mm] 1 41 42 array_surface_chemistry 117 118 unknown_positive_charge 1 41 42 array_surface_chemistry 118 119 poly_L_lysine 1 41 42 array_surface_chemistry 119 120 aldehyde 1 41 42 array_surface_chemistry 120 121 aminosilane 1 42 43 support_manufacturer 121 122 Hybond 1 42 43 support_manufacturer 122 123 Pall 1 42 43 support_manufacturer 123 124 TeleChem 1 42 43 support_manufacturer 124 125 Corning 1 42 43 support_manufacturer 125 126 diehl 1 42 43 support_manufacturer 126 127 stephan 1 43 44 Hybond_support_brand 127 128 non_Hybond 1 43 44 Hybond_support_brand 128 129 N+ 1 44 45 Pall_support_brand 129 130 non_Pall 1 44 45 Pall_support_brand 130 223 Biodyne_B 1 44 45 Pall_support_brand 223 131 polypropylene 1 45 46 Corning_support_brand 131 132 non_Corning 1 45 46 Corning_support_brand 132 133 CMT_GAPS 1 46 5 TeleChem_support_brand 133 134 non_TeleChem 1 46 5 TeleChem_support_brand 134 135 Aldehyde 1 46 5 TeleChem_support_brand 135 17 SuperAldehyde 1 5 69 spotted_material 17 18 PCR 1 5 69 spotted_material 18 19 colonies 1 5 69 spotted_material 19 20 DNA-oligo 1 5 69 spotted_material 20 200 PNA-oligo 1 69 70 spotted_material_property 200 201 single_stranded 1 69 70 spotted_material_property 201 202 double_stranded 1 70 71 number_of_elements_on_array_(without_duplicates) 0 0 [] 1 71 47 elements_spotted_as 202 203 single 1 71 47 elements_spotted_as 203 204 duplicate 1 71 47 elements_spotted_as 204 136 triplicate 1 47 48 spotted_material_purification 136 137 non 1 47 48 spotted_material_purification 137 138 isopropanol_precipitation 1 47 48 spotted_material_purification 138 139 QIAquick 1 47 48 spotted_material_purification 139 140 Multiscreen_NU_Millipore 1 48 49 spotting_buffer 140 141 1.5M_NaCl_0.5M_NaOH 1 48 49 spotting_buffer 141 142 28mM_EDC_4.4volpromill_NMI 1 48 49 spotting_buffer 142 143 spottingsolution_by_diehl 1 48 49 spotting_buffer 143 144 MicroSpotting_solution_TeleChem 1 48 49 spotting_buffer 144 145 3xSSC 1 48 49 spotting_buffer 145 227 3xSSC_50%DMSO 1 48 49 spotting_buffer 227 228 150mM_sodiumphosphate_pH8.5 1 48 49 spotting_buffer 228 146 150mM_sodiumphosphate_pH8.5_0.01%SDS 1 49 50 spotting_robot 146 147 SDDC-2_ESI 1 49 50 spotting_robot 147 148 Biogrid_Biorobotics 1 49 50 spotting_robot 148 149 Microgrid_II_Biorobotics 1 49 50 spotting_robot 149 150 Omnigrid_Genemachines 1 49 50 spotting_robot 150 151 QArray_Genetix 1 50 51 spotting_pins 151 152 solid 1 50 51 spotting_pins 152 153 SMP-3_Telechem 1 50 51 spotting_pins 153 154 Biogrid_Biorobotics 1 51 52 relative_humidity 154 155 defined 1 51 52 relative_humidity 155 156 estimated 1 51 52 relative_humidity 156 157 unknown(enter_0%) 1 52 53 relative_humidity 0 0 [%] 1 53 54 temperature 157 158 defined 1 53 54 temperature 158 159 estimated 1 53 54 temperature 159 160 unknown(enter_0deg.C) 1 54 55 temperature 0 0 [deg.C] 1 55 77 postprocessing 160 161 neutralizing_by_1.5MNaCL_0.5MTrispH7.5_1mMEDTA 1 55 77 postprocessing 161 162 2h_at_65deg.C 1 55 77 postprocessing 162 163 succinic_anhydride_Stanford_protocol 1 55 77 postprocessing 163 164 succinic_anhydride_protocol_by_diehl 1 55 77 postprocessing 164 165 BSA_Tigr_protocol 1 55 77 postprocessing 165 224 NaBH4_Telechem_protocol 1 77 78 uv_crosslink_applicable 224 225 no(enter_0) 1 77 78 uv_crosslink_applicable 225 21 yes 1 78 6 uv_crosslink_energy 0 0 [x100microJpercm2] 1 6 7 readfile 0 0 [] 1 7 8 array_hybridisation 0 0 [] 2 8 9 material_source 21 22 fresh 2 8 9 material_source 22 23 frozen 2 8 9 material_source 23 94 RNA_later 2 8 9 material_source 94 24 cDNA_subtraction 2 9 10 preparation_of_total_RNA 24 25 trizol 2 9 10 preparation_of_total_RNA 25 26 columns 2 9 10 preparation_of_total_RNA 26 95 phenol 2 9 10 preparation_of_total_RNA 95 27 not_applicable 2 10 11 preparation_of_PolyA+ 27 28 none 2 10 11 preparation_of_PolyA+ 28 29 dynabeads 2 10 11 preparation_of_PolyA+ 29 30 oligotex 2 10 11 preparation_of_PolyA+ 30 96 cellulose 2 10 11 preparation_of_PolyA+ 96 31 not_applicable 3 11 40 amount_of_RNA 0 0 [microgram] 3 40 12 amount_of_cDNA 0 0 [microgram] 3 12 13 enzym 31 32 superscript 3 12 13 enzym 32 33 AMV 3 12 13 enzym 33 166 M-MLV 3 12 13 enzym 166 97 OmniScript 3 12 13 enzym 97 34 klenow 3 13 14 priming 34 35 oligo_dT 3 13 14 priming 35 36 anchored_oligo_dT 3 13 14 priming 36 37 random_hexamer 3 13 14 priming 37 98 combined_oligo_dT-random_hexamer 3 13 14 priming 98 38 pcr_select 3 14 56 nucleotide 38 39 dCTP 3 14 56 nucleotide 39 167 dATP 3 14 56 nucleotide 167 168 aa-dUTP 3 14 56 nucleotide 168 169 dUTP 3 56 15 nucleotide_removal 169 170 G50_Pharmacia 3 56 15 nucleotide_removal 170 226 ammium_acetate_isopropanol_precipitation 3 56 15 nucleotide_removal 226 171 Na_acetate_isopropanol_precipitation 3 56 15 nucleotide_removal 171 172 QIAquick_Qiagen 3 56 15 nucleotide_removal 172 173 GFX_columns_Pharmacia 3 56 15 nucleotide_removal 173 40 YM30_Amicon 3 15 66 label 40 41 33P 3 15 66 label 41 42 32P 3 15 66 label 42 43 Cy3 3 15 66 label 43 174 Cy5 3 15 66 label 174 175 Alexa488 3 15 66 label 175 193 Alexa594 3 66 38 days_from_calibration_date_applicable 193 194 yes 3 66 38 days_from_calibration_date_applicable 194 44 no(enter_0d) 3 38 16 days_from_calibration_date 0 0 [d] 3 16 17 label_incorporation_rate 0 0 [%] 3 17 18 total_activity 0 0 [cpm] 4 18 57 buffer 44 229 0.5M_Na_phosphate_pH7.2_7%_SDS 4 18 57 buffer 229 230 5x_SSC_0.1%_SDS 4 18 57 buffer 230 231 Genisphere3DNA 4 18 57 buffer 231 232 Genisphere3DNAformamide 4 18 57 buffer 232 45 3x_SSC_2.5x_denhardts_0.08%_SDS 4 18 57 buffer 45 46 5x_SSC_5x_denhardts_0.5%_SDS 4 18 57 buffer 46 47 4x_SSC_7.2%_Na_sarcosyl 4 18 57 buffer 47 48 Clontech_Express_hyb 4 18 57 buffer 48 221 ambion_Northern_max 4 18 57 buffer 221 176 3x_SSC_5x_denhardts_1%_SDS_5%_dextransulfate_50%_formamide 4 57 19 prehybridization_without_target 176 177 no 4 57 19 prehybridization_without_target 177 49 yes 4 19 75 competitors 49 50 none 4 19 75 competitors 50 51 tRNA 4 19 75 competitors 51 217 Cot1 4 19 75 competitors 217 52 dA20 4 19 75 competitors 52 53 dA40 4 19 75 competitors 53 99 salmon_sperm 4 19 75 competitors 99 100 dA40_Cot1_salmonsperm 4 19 75 competitors 100 101 dA40_Cot1_tRNA_salmonsperm 4 19 75 competitors 101 102 dA40_Cot1_specificoligos_salmonsperm 4 19 75 competitors 102 211 dA40_Cot1_specificoligos_tRNA_salmonsperm 4 75 76 hybridisation_device 211 212 water_bath 4 75 76 hybridisation_device 212 213 rotating_oven 4 76 20 hybridisation_instrument 213 214 hybridisation_bottle 4 76 20 hybridisation_instrument 214 215 hybridisation_chamber_corning 4 76 20 hybridisation_instrument 215 216 hybridisation_chamber_TeleChem 4 76 20 hybridisation_instrument 216 178 hybridisation_chamber_ClonTech 4 20 21 hybridisation_temp 0 0 [deg.C] 4 21 58 buffer_volume 0 0 [ml] 4 58 59 coverslip_used 178 179 no_(enter_size_0) 4 58 59 coverslip_used 179 54 yes 4 59 22 coverslip_size 0 0 [mmxmm] 4 22 23 hybridisation_length 0 0 [h] 5 23 24 wash_buffer 54 55 0.1xSSC_0.1%SDS 5 23 24 wash_buffer 55 56 0.6xSSC_1%SDS 5 23 24 wash_buffer 56 222 0.2xSSC_0.1%SDS 5 23 24 wash_buffer 222 233 0.2xSSC 5 23 24 wash_buffer 233 234 0.1xSSC 5 23 24 wash_buffer 234 57 0.06xSSC 5 23 24 wash_buffer 57 180 40mMNaPipH7_0.1%SDS 5 24 25 times 0 0 [] 5 25 26 wash_length 0 0 [min] 5 26 60 temperature 0 0 [deg.C] 6 60 27 exposure_time_applicable 180 181 yes 6 60 27 exposure_time_applicable 181 58 no_(enter_0h) 6 27 28 exposure_time 0 0 [h] 6 28 72 measuring_device 58 59 MD_storm860_phos 6 28 72 measuring_device 59 60 MD_storm860_red 6 28 72 measuring_device 60 113 MD_storm860_blue 6 28 72 measuring_device 113 114 MD_425 6 28 72 measuring_device 114 61 MD_475A_phos 6 28 72 measuring_device 61 109 Fuji_BAS1500 6 28 72 measuring_device 109 62 Fuji_FLA3000 6 28 72 measuring_device 62 63 BioRad 6 28 72 measuring_device 63 182 ScanArray3000_GSI_Lumonics 6 28 72 measuring_device 182 183 ScanArray5000_GSI_Lumonics 6 28 72 measuring_device 183 205 Axon_4000a_Axon 6 72 73 scanning_software 205 206 Fuji_Image_Reader_FLA3000_3000G_V1.0 6 72 73 scanning_software 206 207 BAS_reader_V2.26beta 6 72 73 scanning_software 207 208 Storm_scanner_control 6 72 73 scanning_software 208 209 Typhoon_scanner_control_V1.0 6 72 73 scanning_software 209 210 Scan_Array3000_V3.11_Controller_V2.03 6 72 73 scanning_software 210 184 Scan_Array_V2.1 6 73 61 spacial_resolution 0 0 [microm] 6 61 62 pixelsize 0 0 [micromxmicrom] 6 62 63 PMT_setting_applicable 184 185 no(enter_0%) 6 62 63 PMT_setting_applicable 185 186 yes 6 63 64 PMT_setting 0 0 [%] 6 64 65 laser_power_setting_applicable 186 187 no(enter_0%) 6 64 65 laser_power_setting_applicable 187 64 yes 6 65 29 laser_power_setting 0 0 [%] 6 29 30 imaging_software 64 65 AIS 6 29 30 imaging_software 65 66 HDG 6 29 30 imaging_software 66 67 XDotsReader 6 29 30 imaging_software 67 68 imagene 6 29 30 imaging_software 68 188 Xdigitise 6 29 30 imaging_software 188 189 GenePixPro 6 29 30 imaging_software 189 69 QuantArray 6 30 31 background_correction 69 70 none 6 30 31 background_correction 70 71 local_background 6 30 31 background_correction 71 72 block_background 6 30 31 background_correction 72 73 empty_spots_average 6 30 31 background_correction 73 74 empty_spots_per_block 6 31 74 spot_detection 74 75 all_spots 6 31 74 spot_detection 75 76 only_positive_spots 6 74 32 spot_dimension_(diameter) 0 0 [microm] 6 32 33 spot_size 76 77 fixed 6 32 33 spot_size 77 78 variable 6 33 34 intensity_measurement 78 79 highest_value_in_spot_centre 6 33 34 intensity_measurement 79 80 sum_of_pixels_within_boundary 6 33 34 intensity_measurement 80 81 mean_of_pixels_within_boundary 7 34 35 organism 81 82 Saccharomyces_cerevisiae 7 34 35 organism 82 83 Arabidopsis_thaliana 7 34 35 organism 83 103 murine_biopsy 7 34 35 organism 103 84 murine_cell_line 7 34 35 organism 84 85 human_biopsy 7 34 35 organism 85 86 human_cell_line 7 34 35 organism 86 192 Bacillus_subtilis 7 34 35 organism 192 199 Trypanosoma_brucei 7 34 35 organism 199 220 Candida_albicans 7 34 35 organism 220 218 Neurospora_crassa 8 35 36 date_of_entry_day 0 0 [] 8 36 37 date_of_entry_month 0 0 [] 8 37 39 date_of_entry_year 0 0 [] 3 39 7035 experimentator 218 104 aign 8 39 7035 experimentator 104 235 bastuk 8 39 7035 experimentator 235 115 bauer 8 39 7035 experimentator 115 105 becerra 8 39 7035 experimentator 105 88 bier 8 39 7035 experimentator 88 190 boer 8 39 7035 experimentator 190 196 diehl 8 39 7035 experimentator 196 191 fischer 8 39 7035 experimentator 191 219 grahlmann 8 39 7035 experimentator 219 87 grees 8 39 7035 experimentator 87 91 hauser 8 39 7035 experimentator 91 112 kornacker 8 39 7035 experimentator 112 107 lagorce 8 39 7035 experimentator 107 90 lombardia 8 39 7035 experimentator 90 108 lutz 8 39 7035 experimentator 108 92 meijer 8 39 7035 experimentator 92 198 mendel 8 39 7035 experimentator 198 195 reile 8 39 7035 experimentator 195 197 scheideler 8 39 7035 experimentator 197 111 schrenk 8 39 7035 experimentator 111 110 steiner 8 39 7035 experimentator 110 106 sueltmann 8 39 7035 experimentator 106 89 tournu 8 39 7035 experimentator 89 93 wilmer 8 39 7035 experimentator 93 116 wittig 8 39 7035 experimentator 116 7087 yin 9 7035 7036 strain 7087 7088 Sc_FY1679 9 7035 7036 strain 7088 7089 RS453 9 7035 7036 strain 7089 7090 Y546 9 7035 7036 strain 7090 7091 CEN_PK2 9 7035 7036 strain 7091 7092 3E2 9 7035 7036 strain 7092 7124 702 9 7035 7036 strain 7124 7125 MYC730 9 7035 7036 strain 7125 7126 T73 9 7035 7036 strain 7126 7127 WC4alpha 9 7035 7036 strain 7127 7128 YSH2alpha 9 7035 7036 strain 7128 7129 FY73 9 7035 7036 strain 7129 7130 L5528 9 7035 7036 strain 7130 7139 L5743 9 7035 7036 strain 7139 7140 W303 9 7035 7036 strain 7140 7141 FY834 9 7035 7036 strain 7141 7142 AR27 9 7035 7036 strain 7142 7143 X2180 9 7035 7036 strain 7143 7149 aGH1 9 7035 7036 strain 7149 7150 SEY6210 9 7035 7036 strain 7150 7151 Ca_SC5314(Can14) 9 7035 7036 strain 7151 7152 Ca_CAI_4 9 7035 7036 strain 7152 7153 Nc_740R23_1A 9 7035 7036 strain 7153 7154 Nc_deltaWC_1 9 7035 7036 strain 7154 7093 Nc_deltaWC_2 9 7036 7037 mating_type 7093 7094 a 9 7036 7037 mating_type 7094 7095 alpha 9 7036 7037 mating_type 7095 7155 both 9 7036 7037 mating_type 7155 7100 not_applicable 10 7037 7038 genetic_variation 7100 7096 WT 10 7037 7038 genetic_variation 7096 7156 mutation 10 7037 7038 genetic_variation 7156 7097 mutation_heterozygous 10 7037 7038 genetic_variation 7097 7157 ko 10 7037 7038 genetic_variation 7157 7098 ko_heterozygous 10 7037 7038 genetic_variation 7098 7099 overexpression 10 7037 7038 genetic_variation 7099 7158 inducible_promoter 10 7037 7038 genetic_variation 7158 7101 clinical_isolate 10 7038 7056 transgene 0 0 [no_in_y1_genes] 10 7056 7057 2nd_genetic_variation 7100 7096 WT 10 7056 7057 2nd_genetic_variation 7096 7156 mutation 10 7056 7057 2nd_genetic_variation 7156 7097 mutation_heterozygous 10 7056 7057 2nd_genetic_variation 7097 7157 ko 10 7056 7057 2nd_genetic_variation 7157 7098 ko_heterozygous 10 7056 7057 2nd_genetic_variation 7098 7099 overexpression 10 7056 7057 2nd_genetic_variation 7099 7158 inducible_promoter 10 7056 7057 2nd_genetic_variation 7158 7101 clinical_isolate 10 7057 7058 2nd_transgene 0 0 [no_in_y1_genes] 10 7058 7059 3rd_genetic_variation 7100 7096 WT 10 7058 7059 3rd_genetic_variation 7096 7156 mutation 10 7058 7059 3rd_genetic_variation 7156 7097 mutation_heterozygous 10 7058 7059 3rd_genetic_variation 7097 7157 ko 10 7058 7059 3rd_genetic_variation 7157 7098 ko_heterozygous 10 7058 7059 3rd_genetic_variation 7098 7099 overexpression 10 7058 7059 3rd_genetic_variation 7099 7158 inducible_promoter 10 7058 7059 3rd_genetic_variation 7158 7101 clinical_isolate 10 7059 7060 3rd_transgene 0 0 [no_in_y1_genes] 10 7060 7061 4th_genetic_variation 7100 7096 WT 10 7060 7061 4th_genetic_variation 7096 7156 mutation 10 7060 7061 4th_genetic_variation 7156 7097 mutation_heterozygous 10 7060 7061 4th_genetic_variation 7097 7157 ko 10 7060 7061 4th_genetic_variation 7157 7098 ko_heterozygous 10 7060 7061 4th_genetic_variation 7098 7099 overexpression 10 7060 7061 4th_genetic_variation 7099 7158 inducible_promoter 10 7060 7061 4th_genetic_variation 7158 7101 clinical_isolate 10 7061 7062 4th_transgene 0 0 [no_in_y1_genes] 10 7062 7063 5th_genetic_variation 7100 7096 WT 10 7062 7063 5th_genetic_variation 7096 7156 mutation 10 7062 7063 5th_genetic_variation 7156 7097 mutation_heterozygous 10 7062 7063 5th_genetic_variation 7097 7157 ko 10 7062 7063 5th_genetic_variation 7157 7098 ko_heterozygous 10 7062 7063 5th_genetic_variation 7098 7099 overexpression 10 7062 7063 5th_genetic_variation 7099 7158 inducible_promoter 10 7062 7063 5th_genetic_variation 7158 7101 clinical_isolate 10 7063 7039 5th_transgene 0 0 [no_in_y1_genes] 11 7039 7040 leucine 7101 7102 yes 11 7039 7040 leucine 7102 7103 no 11 7040 7041 uracil 7103 7104 yes 11 7040 7041 uracil 7104 7105 no 11 7041 7042 tryptophan 7105 7106 yes 11 7041 7042 tryptophan 7106 7107 no 11 7042 7043 histidine 7107 7108 yes 11 7042 7043 histidine 7108 7109 no 11 7043 7044 lysine 7109 7110 yes 11 7043 7044 lysine 7110 7111 no 11 7044 7068 adenine 7111 7112 yes 11 7044 7068 adenine 7112 7159 no 11 7068 7069 arginine 7159 7160 no 11 7068 7069 arginine 7160 7161 yes 11 7069 7066 MPA_(mycophenolic_acid) 7161 7162 no 11 7069 7066 MPA_(mycophenolic_acid) 7162 7137 yes 12 7066 7045 culture 7137 7138 liquid 12 7066 7045 culture 7138 7163 solid 12 7066 7045 culture 7163 7113 glycerol_stock 12 7045 7070 growth_phase 7113 7131 exponential 12 7045 7070 growth_phase 7131 7114 pseudo_hyphal 12 7045 7070 growth_phase 7114 7147 stationary 12 7045 7070 growth_phase 7147 7164 arrested 12 7045 7070 growth_phase 7164 7165 unknown 12 7070 7071 morphology 7165 7166 unknown 12 7070 7071 morphology 7166 7167 yeasty 12 7070 7071 morphology 7167 7168 hyphal 12 7070 7071 morphology 7168 7169 pseudo_hyphal 12 7071 7046 life_cycle_status 7169 7170 unknown 12 7071 7046 life_cycle_status 7170 7171 conidial 12 7071 7046 life_cycle_status 7171 7172 mycedial 12 7071 7046 life_cycle_status 7172 7115 perithecial 12 7046 7064 temperature 0 0 [deg.C] 12 7064 7047 pH_(enter_0_if_unknown) 0 0 [] 12 7047 7072 energy_metabolism 7115 7116 aerob 12 7047 7072 energy_metabolism 7116 7173 anaerob 12 7072 7073 light_periods 7173 7174 unknown 12 7072 7073 light_periods 7174 7175 dark 12 7072 7073 light_periods 7175 7176 light 12 7073 7049 medium_base 7176 7177 YP 12 7073 7049 medium_base 7177 7178 SC 12 7073 7049 medium_base 7178 7179 MV 12 7073 7049 medium_base 7179 7180 YNB 12 7073 7049 medium_base 7180 7181 YNB_without_aa_without_am_sulfate 12 7073 7049 medium_base 7181 7182 YNB_without_calcium 12 7073 7049 medium_base 7182 7183 CM 12 7073 7049 medium_base 7183 7184 alpha_MEM 12 7073 7049 medium_base 7184 7185 RPMI 12 7073 7049 medium_base 7185 7186 spider 12 7073 7049 medium_base 7186 7187 LEE 12 7073 7049 medium_base 7187 7188 mouse 12 7073 7049 medium_base 7188 7189 cell_culture 12 7073 7049 medium_base 7189 7190 Vogels_minimal 13 7049 7050 glucose 0 0 [%] 13 7050 7051 galactose 0 0 [%] 13 7051 7052 ethanol 0 0 [%] 13 7052 7065 glycerol 0 0 [%] 13 7065 7067 sucrose 0 0 [%] 13 7067 7074 lactate 0 0 [%] 14 7074 7075 culture 7190 7191 liquid 14 7074 7075 culture 7191 7192 solid 14 7075 7076 growth_phase 7192 7193 unknown 14 7075 7076 growth_phase 7193 7194 exponential 14 7075 7076 growth_phase 7194 7195 stationary 14 7075 7076 growth_phase 7195 7196 arrested 14 7076 7077 morphology 7196 7197 unknown 14 7076 7077 morphology 7197 7198 yeasty 14 7076 7077 morphology 7198 7199 hyphal 14 7076 7077 morphology 7199 7200 pseudo_hyphal 14 7077 7078 life_cycle_status 7200 7201 unknown 14 7077 7078 life_cycle_status 7201 7202 conidial 14 7077 7078 life_cycle_status 7202 7203 mycedial 14 7077 7078 life_cycle_status 7203 7204 perithecial 14 7078 7079 temperature 0 0 [deg.C] 14 7079 7080 pH_(enter_0_if_unknown) 0 0 [] 14 7080 7081 energy_metabolism 7204 7205 aerob 14 7080 7081 energy_metabolism 7205 7206 anaerob 15 7081 7082 base 7206 7207 YP 15 7081 7082 base 7207 7208 SC 15 7081 7082 base 7208 7209 MV 15 7081 7082 base 7209 7210 YNB 15 7081 7082 base 7210 7211 YNB_without_aa_without_am_sulfate 15 7081 7082 base 7211 7212 YNB_without_calcium 15 7081 7082 base 7212 7213 CM 15 7081 7082 base 7213 7214 alpha_MEM 15 7081 7082 base 7214 7215 RPMI 15 7081 7082 base 7215 7216 spider 15 7081 7082 base 7216 7217 LEE 15 7081 7082 base 7217 7218 mouse 15 7081 7082 base 7218 7219 cell_culture 15 7081 7082 base 7219 7220 Vogels_minimal 16 7082 7083 glucose 0 0 [%] 16 7083 7084 galactose 0 0 [%] 16 7084 7085 ethanol 0 0 [%] 16 7085 7086 glycerol 0 0 [%] 16 7086 7087 sucrose 0 0 [%] 16 7087 7088 lactate 0 0 [%] 17 7088 7089 temporary_additive 7220 7221 none 17 7088 7089 temporary_additive 7221 7222 H2O2 17 7088 7089 temporary_additive 7222 7223 NaCl 17 7088 7089 temporary_additive 7223 7224 calcium 17 7088 7089 temporary_additive 7224 7225 isoamylalcohol 17 7088 7089 temporary_additive 7225 7226 sorbitol 17 7088 7089 temporary_additive 7226 7227 ammonium_sulfate 17 7088 7089 temporary_additive 7227 7228 glucose 17 7088 7089 temporary_additive 7228 7229 FCS 17 7089 7090 concentration 0 0 [mM] 18 7090 7091 incubation_period_with_additive 0 0 [min] 18 7091 7092 incubation_period_after_temperature_shift 0 0 [min] 18 7092 7093 incubation_period_after_ph_shift 0 0 [min] 18 7093 7094 incubation_period_after_medium_shift 0 0 [min] 18 7094 7095 incubation_period_after_C_source_shift 0 0 [min] 19 7095 7096 first_period 7229 7230 dark 19 7095 7096 first_period 7230 7231 light 19 7096 7097 first_period_duration 0 0 [h] 19 7097 7098 second_period 7231 7232 dark 19 7097 7098 second_period 7232 -1 light 19 7098 -1 second_period_duration 0 0 [h]