PhyResSE: web tool delineating Mycobacterium tuberculosis antibiotic resistance and lineage from whole-genome sequencing data.
Feuerriegel S, Schleusener V, Beckert P, Kohl TA, Miotto P, Cirillo DM, Cabibbe AM, Niemann S, Fellenberg K.
J Clin Microbiol. 2015 Apr 8. pii: JCM.00025-15. doi: 10.1128/JCM.00025-15

The Phylo-Resistance-Search-Engine uses JavaSkript. It should work on most browsers, however we suggest the newest version of Firefox. Some users experienced problems with Chrome (files disappear and the process tab jumps to "done" without any analysis). It performs six sequential steps (click on the step of interest for further details):